pylazybam
=========

pylazybam.bam module
--------------------
A Module for reading and writing BAM format files

Note that for convenience the functions from pylazybam.decoders and pylazybam.tags
are also imported into the pylazybam.bam namespace

.. automodule:: pylazybam.bam
   :members:
   :undoc-members:
   :show-inheritance:
   :inherited-members:

pylazybam.decoders module
-------------------------
Format decoders for BAM alignment data types

.. automodule:: pylazybam.decoders
   :members:
   :undoc-members:
   :show-inheritance:

pylazybam.tags module
---------------------
Functions for extracting and decoding SAM tag data from BAM alignments

.. automodule:: pylazybam.tags
   :members:
   :undoc-members:
   :show-inheritance: